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A novel method for multifactorial biochemical experiments design based on combinational design theory

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posted on 2024-07-12, 18:19 authored by Xun Wang, Beibei Sun, Boyang Liu, Yaping Fu, Pan Zheng
Experimental design focuses on describing or explaining the multifactorial interactions that are hypothesized to reflect the variation. The design introduces conditions that may directly affect the variation, where particular conditions are purposely selected for observation. Combinatorial design theory deals with the existence, construction and properties of systems of finite sets whose arrangements satisfy generalized concepts of balance and/or symmetry. In this work, borrowing the concept of “balance” in combinatorial design theory, a novel method for multifactorial bio-chemical experiments design is proposed, where balanced templates in combinational design are used to select the conditions for observation. Balanced experimental data that covers all the influencing factors of experiments can be obtianed for further processing, such as training set for machine learning models. Finally, a software based on the proposed method is developed for designing experiments with covering influencing factors a certain number of times.

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ISSN

1932-6203

Journal title

PLoS ONE

Volume

12

Issue

11

Article number

article no. e0186853

Publisher

Public Library of Science

Copyright statement

Copyright © 2017 Wang et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Language

eng

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